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elxTransformRigidityPenaltyTerm.h
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1 /*======================================================================
2 
3  This file is part of the elastix software.
4 
5  Copyright (c) University Medical Center Utrecht. All rights reserved.
6  See src/CopyrightElastix.txt or http://elastix.isi.uu.nl/legal.php for
7  details.
8 
9  This software is distributed WITHOUT ANY WARRANTY; without even
10  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
11  PURPOSE. See the above copyright notices for more information.
12 
13 ======================================================================*/
14 #ifndef __elxTransformRigidityPenaltyTerm_H__
15 #define __elxTransformRigidityPenaltyTerm_H__
16 
17 #include "elxIncludes.h"
19 
20 #include "elxTimer.h"
21 
22 namespace elastix
23 {
24 using namespace itk;
25 
108 template <class TElastix >
111  ITK_TYPENAME MetricBase<TElastix>::FixedImageType,
112  double >,
113  public MetricBase<TElastix>
114 {
115 public:
116 
121  double > Superclass1;
123  typedef SmartPointer<Self> Pointer;
124  typedef SmartPointer<const Self> ConstPointer;
125 
127  itkNewMacro( Self );
128 
131 
136  elxClassNameMacro( "TransformRigidityPenalty" );
137 
154  typedef typename Superclass1::RealType RealType;
177 
179 
181  itkStaticConstMacro( FixedImageDimension, unsigned int,
182  FixedImageType::ImageDimension );
183 
185  itkStaticConstMacro( MovingImageDimension, unsigned int,
186  MovingImageType::ImageDimension );
187 
196 
201 
205  virtual void Initialize( void ) throw (ExceptionObject);
206 
211  virtual void BeforeEachResolution( void );
212 
219  virtual void BeforeRegistration( void );
220 
225  virtual void AfterEachIteration( void );
226 
231  virtual void SelectNewSamples( void ){};
232 
233 protected:
234 
237 
240 
241 private:
242 
244  TransformRigidityPenalty( const Self& ); // purposely not implemented
246  void operator=( const Self& ); // purposely not implemented
247 
248 }; // end class TransformRigidityPenalty
249 
250 
251 } // end namespace elastix
252 
253 
254 #ifndef ITK_MANUAL_INSTANTIATION
255 #include "elxTransformRigidityPenaltyTerm.hxx"
256 #endif
257 
258 #endif // end #ifndef __elxTransformRigidityPenaltyTerm_H__
259 
Superclass1::TransformParametersType TransformParametersType
Superclass::MovingImageMaskType MovingImageMaskType
Superclass::ElastixPointer ElastixPointer
Definition: elxMetricBase.h:86
Superclass::MovingImageConstPointer MovingImageConstPointer
Superclass::RegistrationType RegistrationType
Definition: elxMetricBase.h:89
Superclass1::FixedImagePixelType FixedImagePixelType
Superclass::ImageSampleContainerPointer ImageSampleContainerPointer
Superclass1::FixedImageConstPointer FixedImageConstPointer
Superclass::ConfigurationType ConfigurationType
Definition: elxMetricBase.h:87
Superclass1::GradientImageFilterPointer GradientImageFilterPointer
Superclass1::MovingImageLimiterType MovingImageLimiterType
#define elxClassNameMacro(_name)
Definition: elxMacro.h:254
TransformRigidityPenaltyTerm< typename MetricBase< TElastix >::FixedImageType, double > Superclass1
SmartPointer< Self > Pointer
Definition: elxTimer.h:73
A cost function that calculates a rigidity penalty term.
Superclass::TransformJacobianType TransformJacobianType
Superclass2::RegistrationPointer RegistrationPointer
Superclass::FixedImageMaskPointer FixedImageMaskPointer
Superclass::TransformParametersType TransformParametersType
Superclass1::MovingImageMaskPointer MovingImageMaskPointer
ElastixType::FixedImageType FixedImageType
Definition: elxMetricBase.h:93
Superclass1::GradientPixelType GradientPixelType
Superclass1::MovingImageRegionType MovingImageRegionType
Superclass::MovingImageMaskPointer MovingImageMaskPointer
A penalty term based on non-rigidity.
Superclass::FixedImageRegionType FixedImageRegionType
A class to time the different parts of the registration.
Definition: elxTimer.h:67
Superclass::GradientImagePointer GradientImagePointer
Superclass1::FixedImageMaskType FixedImageMaskType
Superclass1::GradientImageType GradientImageType
Superclass1::GradientImageFilterType GradientImageFilterType
This class is a base class for any image sampler.
Superclass1::ImageSampleContainerPointer ImageSampleContainerPointer
Superclass1::MovingImageLimiterOutputType MovingImageLimiterOutputType
Define a front-end to the STL &quot;vector&quot; container that conforms to the IndexedContainerInterface.
Superclass2::ConfigurationType ConfigurationType
Superclass1::ImageSampleContainerType ImageSampleContainerType
Superclass::GradientImageFilterType GradientImageFilterType
Superclass1::ImageSamplerPointer ImageSamplerPointer
Superclass1::InterpolatorPointer InterpolatorPointer
Superclass1::MovingImagePixelType MovingImagePixelType
Superclass1::FixedImageLimiterOutputType FixedImageLimiterOutputType
SingleValuedCostFunction ITKBaseType
Superclass1::CoefficientImageType CoefficientImageType
Superclass::CoordinateRepresentationType CoordinateRepresentationType
Superclass::MovingImagePixelType MovingImagePixelType
Superclass1::MovingImageConstPointer MovingImageConstPointer
Superclass1::CoordinateRepresentationType CoordinateRepresentationType
Superclass::InterpolatorPointer InterpolatorPointer
Base class for all ITK limiter function objects.
Superclass::ElastixType ElastixType
Definition: elxMetricBase.h:82
Superclass::RegistrationPointer RegistrationPointer
Definition: elxMetricBase.h:90
Superclass::GradientImageFilterPointer GradientImageFilterPointer
Superclass1::TransformJacobianType TransformJacobianType
Superclass::FixedImageMaskType FixedImageMaskType
Superclass1::FixedImageRegionType FixedImageRegionType
BSplineTransformType::ImageType CoefficientImageType
Superclass1::MovingImageMaskType MovingImageMaskType
Superclass::FixedImagePixelType FixedImagePixelType
Superclass1::FixedImageMaskPointer FixedImageMaskPointer
Superclass2::ConfigurationPointer ConfigurationPointer
Superclass::ConfigurationPointer ConfigurationPointer
Definition: elxMetricBase.h:88
Superclass::FixedImageConstPointer FixedImageConstPointer
Superclass1::GradientImagePointer GradientImagePointer
This class is the elastix base class for all Metrics.
Definition: elxMetricBase.h:73
Superclass1::FixedImageLimiterType FixedImageLimiterType


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